STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105756259Double C2-like domain-containing protein beta. (297 aa)    
Predicted Functional Partners:
LOC101360127
Ras-related protein Rab-3B.
   
 
 0.455
LOC101350062
Ras-related protein Rab-3D.
   
 
 0.455
LOC101356559
Ras-related protein Rab-3C.
   
 
 0.455
LOC101343280
Ras-related protein Rab-3A.
   
 
 0.455
LOC101353255
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.449
LOC101349624
Rab effector Noc2.
 
    
 0.447
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.