STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101341286UDP-glucuronic acid decarboxylase 1. (384 aa)    
Predicted Functional Partners:
LOC101356148
UDP-glucose 6-dehydrogenase.
 0.996
LOC101342696
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.921
LOC101353527
SH3 domain-containing RING finger protein 3.
   
  
 0.751
LOC101359760
Mannose-1-phosphate guanyltransferase beta isoform X1.
  
 0.748
LOC101360596
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.746
LOC101350577
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.736
LOC101355778
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
0.735
LOC101353490
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.733
LOC101342853
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.724
LOC101356190
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.722
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.