STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101343464Adhesion G protein-coupled receptor B1; Belongs to the G-protein coupled receptor 2 family. (1828 aa)    
Predicted Functional Partners:
LOC101354044
ranBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 0.989
LOC101350128
Ran GTPase-activating protein 1 isoform X1.
   
 0.835
LOC101355525
Importin subunit beta-1.
   
 0.825
LOC101359743
Nuclear pore complex protein Nup153.
    
 0.746
LOC101346153
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.731
LOC101347569
Ran-specific GTPase-activating protein isoform X1.
   
 0.725
LOC101354977
GRIP and coiled-coil domain-containing protein 2 isoform X1.
   
 0.725
LOC101346495
Nuclear pore complex protein Nup50.
   
 0.666
LOC101346048
Ran guanine nucleotide release factor.
    
 
 0.644
LOC101342921
Nuclear pore complex protein Nup214.
    
 0.641
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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