STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358674Opioid-binding protein/cell adhesion molecule isoform X1. (354 aa)    
Predicted Functional Partners:
LOC101343279
Dynamin-3 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.544
LOC101352598
SLIT and NTRK-like protein 1.
   
 0.520
LOC101346895
Potassium voltage-gated channel subfamily F member 1; Belongs to the potassium channel family.
   
 
 0.461
LOC101345696
Gamma-aminobutyric acid receptor subunit alpha-5; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.459
LOC101349623
Voltage-gated potassium channel subunit beta-3 isoform X1.
   
  
 0.456
LOC101355819
Potassium voltage-gated channel subfamily H member 3.
      
 0.435
LOC101341002
Fibroblast growth factor receptor.
   
 0.435
LOC101358590
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
0.434
LOC101351330
Voltage-dependent L-type calcium channel subunit beta-1 isoform X1.
     
 0.414
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.