STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101340517Single-minded homolog 2. (578 aa)    
Predicted Functional Partners:
LOC101354646
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
   
  
 0.729
LOC101343137
Aryl hydrocarbon receptor nuclear translocator 2 isoform X1.
    
 
0.694
LOC101340519
Aryl hydrocarbon receptor nuclear translocator.
    
 
0.694
LOC101356904
Aryl hydrocarbon receptor nuclear translocator-like protein 2.
   
 
0.415
LOC101353204
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1.
   
 
0.405
LOC101356540
Homeobox protein orthopedia.
   
  
 0.402
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.