STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101351822Mitochondrial import receptor subunit TOM34. (314 aa)    
Predicted Functional Partners:
LOC101352197
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.791
LOC101345946
dnaJ homolog subfamily C member 7.
   
0.590
LOC101360049
Putative tetratricopeptide repeat protein 41.
   
 0.577
LOC101345178
Telomerase protein component 1.
   
 0.577
LOC101349572
Protein PTHB1 isoform X1.
    
 0.577
LOC101361452
Parafibromin isoform X1.
    
 0.532
LOC101354267
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.530
LOC101352326
Cell division cycle protein 16 homolog isoform X1.
    
 0.530
LOC101360452
RNA polymerase II-associated factor 1 homolog.
   
 0.527
LOC101356967
Tetratricopeptide repeat protein 8 isoform X1.
    
 0.526
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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