STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101359526Alpha-taxilin. (561 aa)    
Predicted Functional Partners:
LOC101343054
Syntaxin-3; Belongs to the syntaxin family.
    
 0.828
LOC101355044
Syntaxin-4; Belongs to the syntaxin family.
    
 0.819
LOC101361620
syntaxin-1A; Belongs to the syntaxin family.
    
 0.637
LOC101354615
syntaxin-1B; Belongs to the syntaxin family.
    
 0.637
LOC101346888
Serine-rich and transmembrane domain-containing protein 1.
      
 0.580
LOC101358744
Dual specificity protein kinase CLK3 isoform X1; Belongs to the protein kinase superfamily.
      
 0.571
LOC101360647
Serine/threonine-protein phosphatase 1 regulatory subunit 10.
    
 
 0.554
LOC101358860
Gamma-taxilin.
  
 
  
0.551
LOC101359766
Transmembrane protein 14A.
      
 0.551
LOC101346468
Protein FAM91A1 isoform X1.
      
 0.549
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.