STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101360039Forkhead box protein J3. (622 aa)    
Predicted Functional Partners:
LOC101357259
Transcription factor SOX-6 isoform X1.
    
 
 0.565
LOC101355240
Paired box protein Pax-6 isoform X1.
   
 0.561
LOC101341602
Neurofibromin isoform X1.
   
  
 0.552
LOC101349614
Histone acetyltransferase p300.
   
 0.431
LOC101344282
CREB-binding protein.
   
 0.429
LOC101348884
Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development.
   
 
 0.426
LOC101343118
Centromere protein P isoform X1.
    
 0.410
LOC101342951
NAD-dependent protein deacetylase sirtuin-1 isoform X1.
    
 0.408
LOC101350739
Steroid hormone receptor ERR1 isoform X1.
    
 0.404
LOC101340574
Paired box protein Pax-4.
   
 0.400
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.