STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111819582Glutamate receptor ionotropic, kainate 1-like; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (170 aa)    
Predicted Functional Partners:
LOC101348492
Glutamate receptor ionotropic, kainate 1.
 
      0.856
LOC111819583
Glutamate receptor ionotropic, kainate 1-like.
 
      0.790
LOC101360805
Glutamate receptor ionotropic, kainate 5.
  
 
0.614
LOC101361210
Glutamate receptor ionotropic, kainate 4.
  
 
0.612
LOC101360753
Disks large homolog 4 isoform X2; Belongs to the MAGUK family.
   
 0.595
LOC101340890
Glutamate receptor ionotropic, kainate 3.
  
0.480
LOC101354464
Neuropilin and tolloid-like protein 1.
   
 
 0.444
LOC101356813
Disks large homolog 3 isoform X1; Belongs to the MAGUK family.
   
 0.433
LOC101351136
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.
   
 
 0.404
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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