STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101347488Non-specific lipid-transfer protein isoform X1; Belongs to the thiolase-like superfamily. Thiolase family. (543 aa)    
Predicted Functional Partners:
LOC101344803
PEX5-related protein isoform X1.
   
 0.996
LOC101360100
Peroxisomal biogenesis factor 5 isoform X1.
   
 0.996
LOC101355599
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.988
LOC101345391
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.988
LOC101360275
enoyl-CoA delta isomerase 2, mitochondrial isoform X1.
  
 0.988
LOC101341576
3-ketoacyl-CoA thiolase, peroxisomal isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
  
0.976
LOC101348063
Acyl-coenzyme A thioesterase 8.
   
 
 0.961
LOC101355846
Peroxisome biogenesis factor 2.
     
 0.955
LOC101361902
LOW QUALITY PROTEIN: bile acyl-CoA synthetase.
   
 
 0.953
LOC101357340
Peroxisome biogenesis factor 13.
   
 
 0.952
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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