STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101343574LOW QUALITY PROTEIN: SH3 domain-containing protein 21. (805 aa)    
Predicted Functional Partners:
LOC101344374
Lactase-like protein; Belongs to the glycosyl hydrolase 1 family.
      
 0.573
LOC101357091
Zinc finger CCCH domain-containing protein 8 isoform X1.
      
 0.550
LOC101342917
Protein shisa-4.
      
 0.509
LOC101353102
Leucine-rich repeat-containing protein 40 isoform X1.
   
 
 0.492
LOC101340306
BEN domain-containing protein 7 isoform X1.
      
 0.485
LOC101349878
Nuclear apoptosis-inducing factor 1.
      
 0.479
LOC101351338
SOSS complex subunit B1.
      
 0.465
LOC101346317
Molybdenum cofactor biosynthesis protein 1.
      
 0.465
LOC101344367
snRNA-activating protein complex subunit 3.
      
 0.463
LOC101356902
Leptin receptor overlapping transcript-like 1.
      
 0.463
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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