STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111820146Parvalbumin beta-like. (130 aa)    
Predicted Functional Partners:
LOC101360581
Peripheral plasma membrane protein CASK isoform X1; Belongs to the MAGUK family.
    
 0.655
LOC101341057
WD repeat-containing protein 90.
   
 0.540
LOC101341116
DNA repair protein complementing XP-C cells isoform X1.
    
 0.460
LOC101348151
Serine/threonine-protein kinase DCLK1-like.
   
 0.457
LOC101353945
Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.
   
 0.443
LOC101352240
Peptidylprolyl isomerase.
   
 0.440
LOC101347593
Peptidylprolyl isomerase.
   
 0.440
LOC101342285
Peptidylprolyl isomerase.
   
 0.440
LOC101356235
Troponin I, cardiac muscle isoform X1.
   
 0.429
LOC101361028
Dynein assembly factor 3, axonemal.
   
 0.429
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.