STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101350969EF-hand domain-containing family member C2. (882 aa)    
Predicted Functional Partners:
LOC101341057
WD repeat-containing protein 90.
    
 
 0.888
LOC101341953
Parkin coregulated gene protein.
  
 
 0.846
LOC101343936
Tektin-2.
   
 
 0.759
LOC101344393
Enkurin.
   
 
 0.755
LOC101348268
RIB43A-like with coiled-coils protein 2.
  
 
 0.752
LOC101360228
Tektin-3.
   
 
 0.732
LOC101343875
Uncharacterized protein C19orf71 homolog.
    
 
 0.726
LOC101343244
PACRG-like protein.
   
 
 0.725
LOC101342747
Cilia- and flagella-associated protein 52 isoform X1.
   
 
 0.723
LOC101349265
Cilia- and flagella-associated protein 20.
    
 
 0.721
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.