STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101350800Uncharacterized protein KIAA0825 homolog. (1245 aa)    
Predicted Functional Partners:
LOC101340457
Dynein light chain roadblock-type 2 isoform X1.
   
 0.624
LOC101357098
Dynein light chain roadblock; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.
   
 0.624
LOC101352841
Cytoplasmic dynein 2 light intermediate chain 1.
   
 0.618
LOC101341435
WW domain-binding protein 11.
      
 0.574
LOC101343954
Dynein light chain Tctex-type 3.
    
 
 0.569
LOC101346182
Dynein light chain Tctex-type 1 isoform X1.
    
 
 0.569
LOC101343327
Dynein light chain.
    
 0.508
LOC101357722
Dynein light chain.
    
 0.508
LOC101341834
Dynein light chain.
    
 0.508
LOC111822341
Dynein light chain.
    
 0.508
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.