STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101343772Integrin alpha-E; Belongs to the integrin alpha chain family. (1525 aa)    
Predicted Functional Partners:
LOC101357623
Integrin beta; Belongs to the integrin beta chain family.
   
 0.950
LOC101360881
Integrin beta; Belongs to the integrin beta chain family.
   
 0.742
LOC101351714
Focal adhesion kinase 1 isoform X1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.729
LOC101349050
Integrin beta.
   
 0.711
LOC101342748
Adapter molecule crk isoform X1.
     
 0.709
LOC101355809
Crk-like protein.
     
 0.709
LOC101342555
Tyrosine-protein kinase.
   
 0.688
LOC101346861
Breast cancer anti-estrogen resistance protein 1.
     
 0.679
LOC101361092
Fibronectin isoform X3.
   
 
  0.673
LOC101359355
Integrin beta; Belongs to the integrin beta chain family.
   
 0.647
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.