STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101355178Non-specific serine/threonine protein kinase. (524 aa)    
Predicted Functional Partners:
LOC101361943
Cell division control protein 42 homolog isoform X1.
   
 0.993
LOC101354095
Rho guanine nucleotide exchange factor 6 isoform X1.
    
 0.979
LOC101341934
Rho guanine nucleotide exchange factor 7 isoform X1.
    
 0.979
LOC101355428
Ras-related C3 botulinum toxin substrate 2 isoform X1.
   
 0.968
LOC101360313
Ras-related C3 botulinum toxin substrate 3.
   
 0.968
LOC101355115
Cytoplasmic protein.
    
 0.968
LOC101356054
Ras-related C3 botulinum toxin substrate 1.
   
 0.968
LOC101356005
Cytoplasmic protein.
    
 0.968
LOC101343358
Non-specific serine/threonine protein kinase.
  
 
0.963
LOC101345292
LIM domain kinase 2 isoform X1.
    
0.949
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.