STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358359Utrophin isoform X1. (3453 aa)    
Predicted Functional Partners:
LOC101353775
Uncharacterized protein C1orf226 homolog isoform X1.
      
 0.719
LOC101358535
Dystroglycan.
    
 0.679
LOC101360030
Alpha-1-syntrophin.
    
 
 0.678
LOC101357454
Beta-1-syntrophin.
    
 
 0.616
LOC101353769
Beta-2-syntrophin.
    
 
 0.581
LOC101347990
Alpha-catulin.
   
 
 0.536
LOC101344334
Diacylglycerol kinase.
      
 0.520
LOC101350884
Nebulin.
     
 0.519
LOC101349276
Nebulin-like.
     
 0.519
LOC101350894
Dystrobrevin.
   
 
0.495
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.