STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101346346Peroxisomal biogenesis factor 7 isoform X1. (355 aa)    
Predicted Functional Partners:
LOC101341576
3-ketoacyl-CoA thiolase, peroxisomal isoform X1; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.989
LOC101360100
Peroxisomal biogenesis factor 5 isoform X1.
    
 0.964
LOC101341856
Peroxisomal membrane protein PEX14 isoform X1.
    
 0.964
LOC101357340
Peroxisome biogenesis factor 13.
   
 0.957
LOC101344803
PEX5-related protein isoform X1.
    
 0.950
LOC101355950
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
     
 0.908
LOC101359835
Peroxisome biogenesis factor 10.
     
 0.908
LOC101350841
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.908
LOC101346012
AN1-type zinc finger protein 4.
     
 0.905
LOC101341135
Protein FAM185A.
    
 0.901
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.