STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101359888PR domain zinc finger protein 2 isoform X1. (1514 aa)    
Predicted Functional Partners:
LOC101356124
PR domain zinc finger protein 2-like isoform X1.
 
      0.892
LOC101350008
Calmodulin-lysine N-methyltransferase.
     
 0.701
LOC101347174
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1.
     
  0.650
LOC101349481
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
     
  0.650
LOC101358670
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
  0.650
LOC101346006
C-type lectin domain family 1 member B isoform X1.
    
 0.581
LOC101349837
C-type lectin domain family 1 member A.
    
 0.581
LOC101350094
C-type lectin domain family 7 member A isoform X1.
    
 0.581
LOC101349614
Histone acetyltransferase p300.
   
 
 0.440
LOC101348724
Histone-lysine N-methyltransferase ASH1L isoform X1.
  
 0.440
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.