STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101352367Heterogeneous nuclear ribonucleoproteins A2/B1. (353 aa)    
Predicted Functional Partners:
LOC101352952
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1.
   
 0.915
LOC101341169
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 0.911
LOC101357086
Heterogeneous nuclear ribonucleoprotein L isoform X2.
   
 0.904
LOC101341748
Serine/arginine-rich splicing factor 3.
   
 0.882
LOC101349201
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 0.878
LOC101354506
Heterogeneous nuclear ribonucleoprotein U isoform X1.
   
 0.876
LOC101342250
Serine/arginine-rich splicing factor 1 isoform X1.
  
 0.863
LOC101354854
Transformer-2 protein homolog beta isoform X1.
  
 0.836
LOC101354086
Interleukin enhancer-binding factor 3 isoform X4.
   
 
 0.835
LOC101357717
Splicing factor 3B subunit 1 isoform X1.
   
 0.812
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.