STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101350255LOW QUALITY PROTEIN: protein MRVI1. (911 aa)    
Predicted Functional Partners:
LOC101346534
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.986
LOC101346076
cGMP-dependent protein kinase.
   
 0.964
LOC101354392
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.961
LOC101356404
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.961
LOC101352076
cGMP-dependent protein kinase 1.
   
 0.687
LOC111822172
cGMP-dependent protein kinase 1-like isoform X1.
   
 0.687
LOC101357126
Leucine-rich repeat-containing protein 3B.
    
 0.681
LOC101351116
Platelet endothelial aggregation receptor 1.
    
 0.565
LOC101360380
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
    
 0.553
LOC101360962
Storkhead-box protein 1 isoform X1.
      
 0.552
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.