STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101346582Cell cycle checkpoint control protein RAD9B isoform X1. (344 aa)    
Predicted Functional Partners:
LOC101346257
Cell cycle checkpoint protein RAD1.
    
 0.995
LOC101344590
Checkpoint protein; Belongs to the HUS1 family.
    
 0.990
LOC101341680
Serine/threonine-protein kinase ATR isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.977
LOC101345229
Werner syndrome ATP-dependent helicase isoform X1.
   
 0.961
LOC101345529
Cell cycle checkpoint protein RAD17 isoform X1.
   
 0.956
LOC101350213
DNA topoisomerase 2-binding protein 1 isoform X1.
    
 0.947
LOC101341497
Replication factor C subunit 2 isoform X1.
   
 0.944
LOC101344240
Cell cycle checkpoint control protein; Belongs to the rad9 family.
  
  
0.944
LOC101352469
Replication factor C subunit 4.
   
 0.929
LOC101351056
SMC5-SMC6 complex localization factor protein 1 isoform X1.
    
 0.926
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.