STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361657Testis-specific gene 10 protein isoform X1. (885 aa)    
Predicted Functional Partners:
LOC101356968
Intersectin-2 isoform X4.
   
 0.999
LOC101355643
Intersectin-1 isoform X1.
   
 0.984
LOC101352558
cyclin-G-associated kinase.
   
 0.897
LOC101346758
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
   
 0.730
LOC101349926
Serine/threonine-protein kinase PLK4 isoform X1.
   
 0.714
LOC101340472
AP-2 complex subunit sigma isoform X1.
    
 0.670
LOC101348737
Centromere protein J isoform X1.
   
 
 0.662
LOC101355942
Serine/threonine-protein kinase PLK.
   
 0.659
LOC101352012
Growth arrest-specific protein 7.
   
 0.652
LOC101361627
AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.
    
 0.635
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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