STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361794Epithelial membrane protein 3; Probably involved in cell proliferation and cell-cell interactions; Belongs to the PMP-22/EMP/MP20 family. (163 aa)    
Predicted Functional Partners:
LOC101359821
Erythrocyte membrane protein band 4.2 isoform X1.
   
  
 0.579
LOC101358215
Galectin.
   
  
 0.575
LOC105756638
Uncharacterized protein LOC105756638; Belongs to the calycin superfamily. Lipocalin family.
      
 0.548
LOC101348309
Protein S100; Belongs to the S-100 family.
   
  
 0.503
LOC101361058
Protein S100-A10; Belongs to the S-100 family.
  
 
 0.473
LOC101362014
Tumor necrosis factor receptor superfamily member 12A.
      
 0.469
LOC101356480
L-Fucosyltransferase; Belongs to the glycosyltransferase 11 family.
      
 0.435
LOC101343571
Ammonium transporter Rh type A isoform X1; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
      
 0.428
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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