STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101361453SH3 domain-containing kinase-binding protein 1 isoform X6. (713 aa)    
Predicted Functional Partners:
LOC101342874
E3 ubiquitin-protein ligase CBL isoform X1.
    
 0.981
LOC101361983
ubiquitin-40S ribosomal protein S27a.
    
 0.896
LOC101345632
E3 ubiquitin-protein ligase CBL-B.
    
 0.846
LOC101351552
B-cell linker protein isoform X1.
    
 0.826
LOC101345595
Hepatocyte growth factor receptor.
   
 0.810
LOC101356822
Receptor protein-tyrosine kinase.
    
 0.798
LOC101344429
Macrophage-stimulating protein receptor.
   
 0.769
LOC101359012
Growth factor receptor-bound protein 2.
    
0.754
LOC101360887
LOW QUALITY PROTEIN: disabled homolog 1.
    
 0.750
LOC101346379
endophilin-A1.
   
0.741
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.