STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101349311ATP-binding cassette sub-family B member 10, mitochondrial. (559 aa)    
Predicted Functional Partners:
LOC101353157
Ferrochelatase, mitochondrial isoform X1; Belongs to the ferrochelatase family.
   
  
 0.715
LOC101341344
Mitoferrin-1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.707
LOC101360543
Mitoferrin-2 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.689
LOC101341896
G/T mismatch-specific thymine DNA glycosylase isoform X1.
      
 0.677
LOC101345699
Transcription factor E2F6.
    
 
 0.671
LOC101348875
ATP-binding cassette sub-family B member 7, mitochondrial isoform X1.
    
0.599
LOC101361196
ATP-binding cassette sub-family F member 3.
  
 
0.562
LOC101352243
Tapasin isoform X1.
   
 0.555
LOC101355113
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.503
LOC101361381
Cadherin-12 isoform X1; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.488
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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