STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101347027Coagulation factor V; Belongs to the multicopper oxidase family. (2040 aa)    
Predicted Functional Partners:
LOC101347713
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.995
LOC101350529
Vitamin K-dependent protein S.
   
 0.976
LOC101349839
Vitamin K-dependent protein C.
    
 0.975
LOC101347861
LOW QUALITY PROTEIN: coagulation factor X.
   
 0.936
LOC105756635
Vitamin K-dependent protein Z; Belongs to the peptidase S1 family.
   
 0.698
LOC101347612
Coagulation factor VII.
   
 0.676
LOC101352726
Coagulation factor IX isoform X1.
   
 0.665
LOC101358666
Glia-derived nexin isoform X1; Belongs to the serpin family.
   
 0.662
LOC101340357
Coagulation factor VIII; Belongs to the multicopper oxidase family.
  
  
0.661
LOC101347633
Multiple coagulation factor deficiency protein 2.
     
 0.614
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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