STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101358953Golgin-45 isoform X1. (401 aa)    
Predicted Functional Partners:
LOC101346821
Golgi reassembly-stacking protein 2 isoform X1.
   
 0.973
LOC101361351
Golgi reassembly-stacking protein 1 isoform X2.
   
 0.932
LOC101348838
Ras-related protein Rab-2A.
    
 0.734
LOC101352175
LOW QUALITY PROTEIN: ras-related protein Rab-2B.
    
 0.734
LOC101349545
dnaJ homolog subfamily C member 27 isoform X1.
    
 0.667
LOC101358830
Golgi resident protein GCP60.
    
 
 0.643
LOC101360053
Serine/threonine-protein kinase ULK3; Belongs to the protein kinase superfamily.
      
 0.641
LOC101341069
Golgin subfamily A member 5 isoform X1.
   
  
 0.584
LOC101352806
Tetraspanin.
      
 0.555
LOC101350532
Leucine rich adaptor protein 1.
      
 0.551
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.