STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101350331Unconventional myosin-IXb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1985 aa)    
Predicted Functional Partners:
LOC101347213
Rho GTPase-activating protein 1 isoform X1.
     
0.910
LOC101361943
Cell division control protein 42 homolog isoform X1.
    
 0.740
LOC101341682
Anillin.
   
 0.732
LOC101348449
Rho-related GTP-binding protein RhoG.
   
 0.729
LOC101356840
Transforming protein RhoA.
    
 0.727
LOC101349642
Rho-related GTP-binding protein RhoC isoform X1.
    
 0.727
LOC101347794
Rho-related GTP-binding protein RhoB.
    
 0.727
LOC101348923
Ras-like GTP-binding protein rhoA.
    
 0.727
LOC101348727
Rho-related GTP-binding protein RhoQ.
    
 0.716
LOC101349172
Rho-related GTP-binding protein RhoJ.
    
 0.716
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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