STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101351532Thymidylate kinase isoform X1. (222 aa)    
Predicted Functional Partners:
LOC101342300
Thymidylate synthase.
  
 
 0.994
LOC101348932
Thymidine kinase.
  
 
 0.991
LOC101355382
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial.
  
 
 0.973
LOC101357191
Thymidine kinase 2, mitochondrial.
  
 
 0.972
LOC101357538
Adenylate kinase 9 isoform X1.
    
 0.968
LOC101347185
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
 0.968
LOC101360807
Deoxycytidylate deaminase isoform X1.
    
 0.967
LOC101346953
Nucleoside diphosphate kinase.
    
 0.952
LOC105755966
Nucleoside diphosphate kinase.
  
 
 0.949
LOC101361334
Nucleoside diphosphate kinase.
  
 
 0.948
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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