STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101346859Pumilio homolog 2 isoform X1. (1119 aa)    
Predicted Functional Partners:
LOC101352558
cyclin-G-associated kinase.
   
 0.918
LOC101350126
Cytochrome c oxidase copper chaperone.
    
 
 0.747
LOC101359697
Double-stranded RNA-binding protein Staufen homolog 2 isoform X1.
   
 
 0.734
LOC111819095
Polyadenylate-binding protein 2.
    
 
 0.729
LOC101359120
Nanos homolog 2; Belongs to the nanos family.
   
 
 0.708
LOC101351201
Nanos homolog 3; Belongs to the nanos family.
   
 
 0.708
LOC101360166
CCR4-NOT transcription complex subunit 7 isoform X1.
    
 
 0.672
LOC101349512
CCR4-NOT transcription complex subunit 8 isoform X1.
    
 
 0.661
LOC101346724
ectodysplasin-A receptor-associated adapter protein.
   
 
 0.633
LOC101361917
Double-stranded RNA-binding protein Staufen homolog 1 isoform X1.
   
 
 0.625
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.