STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101344247Histone H2B; Belongs to the histone H2B family. (126 aa)    
Predicted Functional Partners:
LOC101357779
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.761
LOC101342476
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.761
LOC101343522
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.761
LOC101356648
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.761
LOC101342448
Histone deacetylase 11 isoform X1.
    
 0.744
LOC101352452
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.744
LOC101347092
Histone deacetylase 10.
    
 0.744
LOC101347918
Histone deacetylase 6.
    
 0.744
LOC101352004
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.744
LOC101344245
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.744
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.