STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111822739Beta-defensin 115-like. (109 aa)    
Predicted Functional Partners:
LOC111822734
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.703
LOC111822736
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
0.680
LOC101348571
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.641
LOC101361232
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.564
LOC101361485
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.505
LOC101360981
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.504
LOC101361994
Beta-defensin 129.
     
 0.500
LOC101357514
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.475
LOC111822826
Beta-defensin 110-like.
     
 0.475
LOC111821587
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
     
 0.419
Your Current Organism:
Trichechus manatus
NCBI taxonomy Id: 127582
Other names: Florida manatee, T. manatus latirostris, Trichechus manatus latirostris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.