STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpCation-transporting ATPase. (966 aa)    
Predicted Functional Partners:
AGR41172.1
ABC transporter ATP-binding protein.
  
 0.716
copA
Copper transporting ATPase.
 
 
 0.624
atpE
F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.618
AGR41173.1
ABC transporter ATP-binding protein.
  
    0.598
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.553
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
   
 
 0.485
pdhD
Pyruvate dehydrogenase E3 component.
  
 
 0.483
AGR41175.1
Hypothetical protein.
       0.459
gapN
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.459
potC
Spermidine/putrescine ABC transporter permease.
  
  
 0.426
Your Current Organism:
Spiroplasma taiwanense
NCBI taxonomy Id: 1276220
Other names: S. taiwanense CT-1, Spiroplasma taiwanense ATCC 43302, Spiroplasma taiwanense CT-1
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