STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR00288.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
pznK_1
Regulatory protein ArsR.
 
     0.945
EMQ97138.1
Protein of unknown function (DUF2809).
  
     0.622
EMR00097.1
Hypothetical protein.
  
     0.589
EMQ99319.1
Transcriptional regulator, CdaR.
  
     0.578
EMQ98970.1
Hypothetical protein.
  
     0.578
EMR00289.1
MATE efflux family protein.
       0.549
EMQ99695.1
ThiF family protein.
  
     0.536
EMQ98459.1
Hypothetical protein.
  
     0.521
EMR00096.1
Hypothetical protein.
  
     0.504
EMQ97544.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Paeniglutamicibacter gangotriensis
NCBI taxonomy Id: 1276920
Other names: Arthrobacter gangotriensis Lz1y, P. gangotriensis Lz1y, Paeniglutamicibacter gangotriensis Lz1y
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.