STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMQ98007.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
EMQ98008.1
Protein of unknown function (DUF3710).
 
     0.857
EMQ98006.1
Protein of unknown function (DUF3159).
       0.711
EMQ97809.1
Hypothetical protein.
  
     0.694
EMQ97572.1
Spore germination protein.
  
     0.690
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
     
 0.688
EMQ99600.1
Hypothetical protein.
  
     0.597
EMQ98823.1
Hypothetical protein.
 
     0.587
EMR00087.1
Hypothetical protein.
  
     0.551
EMQ98010.1
Protein of unknown function (DUF3093).
       0.533
htpX
Peptidase M48 Ste24p; Belongs to the peptidase M48B family.
   
    0.531
Your Current Organism:
Paeniglutamicibacter gangotriensis
NCBI taxonomy Id: 1276920
Other names: Arthrobacter gangotriensis Lz1y, P. gangotriensis Lz1y, Paeniglutamicibacter gangotriensis Lz1y
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.