STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK19665.1COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain. (372 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.557
AKK20206.1
Two-component sensor histidine kinase/response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
      
 0.461
AKK19666.1
Hypothetical protein.
       0.442
AKK19851.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
  
 0.422
AKK19940.1
Type I secretion membrane fusion protein, HlyD; COG0845 Membrane-fusion protein.
  
 
 0.417
Your Current Organism:
Liberibacter africanus
NCBI taxonomy Id: 1277257
Other names: C. Liberibacter africanus PTSAPSY, Candidatus Liberibacter africanus PTSAPSY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.