STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGC48397.1Alginate biosynthesis protein AlgI; Belongs to the membrane-bound acyltransferase family. (472 aa)    
Predicted Functional Partners:
AGC48396.1
Hypothetical protein.
 
    0.881
AGC44898.1
Non-ribosomal peptide synthetase.
 
 
 0.870
AGC44899.1
Non-ribosomal peptide synthetase.
  
 
 0.863
AGC45599.1
Non-ribosomal peptide synthetase.
  
 
 0.863
AGC45639.1
Amino acid adenylation domain-containing protein.
  
 
 0.863
AGC45642.1
Non-ribosomal peptide synthetase.
  
 
 0.863
AGC42721.1
Non-ribosomal peptide synthetase.
  
 
 0.852
AGC43064.1
Non-ribosomal peptide synthetase.
  
 
 0.852
AGC43389.1
Non-ribosomal peptide synthetase.
  
 
 0.852
AGC43421.1
Non-ribosomal peptide synthetase.
  
 
 0.852
Your Current Organism:
Myxococcus stipitatus
NCBI taxonomy Id: 1278073
Other names: M. stipitatus DSM 14675, Myxococcus stipitatus DSM 14675
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.