STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME15469.1Blue copper protein; COG3794 Plastocyanin. (113 aa)    
Predicted Functional Partners:
EME15470.1
Oxidase; COG2132 Putative multicopper oxidases.
 
 
 0.973
EME15472.1
Amine dehydrogenase.
   
   0.959
EME15471.1
Lipoprotein.
       0.842
EME15468.1
Copper binding lipoprotein; COG3794 Plastocyanin.
 
    
0.807
EME20964.1
Hypothetical protein; COG2132 Putative multicopper oxidases.
 
 
 0.804
EME15473.1
Methylamine utilization protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
    0.777
EME22908.1
COG2132 Putative multicopper oxidases.
   
 0.773
EME22911.1
COG2132 Putative multicopper oxidases.
   
 0.773
EME18503.1
COG2132 Putative multicopper oxidases.
   
 0.773
EME15474.1
Methylamine utilization protein.
     
 0.767
Your Current Organism:
Rhodococcus triatomae
NCBI taxonomy Id: 1278078
Other names: R. triatomae BKS 15-14, Rhodococcus triatomae BKS 15-14
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