STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428685_00097Unannotated protein. (154 aa)    
Predicted Functional Partners:
kgd
Unannotated protein.
    
 
 0.999
odhI
Unannotated protein.
 
   
 0.986
pknB_1
Unannotated protein.
 
 
 
 0.965
prkC_2
Unannotated protein.
 
 
 
 0.955
prkC_1
Unannotated protein.
 
 
 
 0.950
pbpA
Unannotated protein.
 
   
 0.948
pstP
Unannotated protein.
 
   
 0.924
ftsW_1
Unannotated protein; Belongs to the SEDS family.
 
   
 0.899
GCA_000428685_00328
Unannotated protein.
  
     0.769
afsK
Unannotated protein.
 
 
 
 0.734
Your Current Organism:
Actinomyces slackii
NCBI taxonomy Id: 1278298
Other names: A. slackii ATCC 49928, Actinomyces slackii ATCC 49928, Actinomyces slackii Sh13/4563
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.