STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428685_01382Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000428685_01381
Unannotated protein.
       0.785
GCA_000428685_02520
Unannotated protein.
  
     0.763
GCA_000428685_00594
Unannotated protein.
  
     0.717
leuB
Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
       0.497
GCA_000428685_01386
Unannotated protein.
 
     0.442
GCA_000428685_01383
Unannotated protein.
       0.429
GCA_000428685_01384
Unannotated protein.
       0.429
GCA_000428685_01385
Unannotated protein.
       0.429
GCA_000428685_01387
Unannotated protein.
 
     0.410
GCA_000428685_02093
Unannotated protein.
  
     0.404
Your Current Organism:
Actinomyces slackii
NCBI taxonomy Id: 1278298
Other names: A. slackii ATCC 49928, Actinomyces slackii ATCC 49928, Actinomyces slackii Sh13/4563
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.