STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381745_00040Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_000381745_00041
Unannotated protein.
 
  
 0.874
GCA_000381745_00471
Unannotated protein.
   
 
 0.767
GCA_000381745_04175
Unannotated protein.
  
     0.597
GCA_000381745_03260
Unannotated protein.
  
     0.587
GCA_000381745_02971
Unannotated protein.
 
  
 0.538
GCA_000381745_00064
Unannotated protein.
 
     0.508
GCA_000381745_01694
Unannotated protein.
  
  
  0.495
GCA_000381745_00414
Unannotated protein.
  
     0.493
GCA_000381745_01410
Unannotated protein.
  
  
 0.488
GCA_000381745_02314
Unannotated protein.
  
  
  0.464
Your Current Organism:
Psychromonas ossibalaenae
NCBI taxonomy Id: 1278307
Other names: P. ossibalaenae ATCC BAA-1528, Psychromonas ossibalaenae ATCC BAA-1528, Psychromonas ossibalaenae JAMM 0738
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.