STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381765_00627Unannotated protein. (556 aa)    
Predicted Functional Partners:
GCA_000381765_00629
Unannotated protein.
 
  
 0.963
GCA_000381765_00621
Unannotated protein.
 
    0.855
GCA_000381765_00620
Unannotated protein.
 
     0.833
GCA_000381765_00628
Unannotated protein.
    
  0.820
GCA_000381765_00626
Unannotated protein.
       0.808
GCA_000381765_00630
Unannotated protein.
  
    0.808
GCA_000381765_00617
Unannotated protein.
 
     0.738
GCA_000381765_00631
Unannotated protein.
  
    0.679
GCA_000381765_00625
Unannotated protein.
       0.651
GCA_000381765_00366
Unannotated protein.
    
  0.611
Your Current Organism:
Zimmermannella faecalis
NCBI taxonomy Id: 1278308
Other names: Pseudoclavibacter faecalis ATCC 13722, Zimmermannella faecalis ATCC 13722, Zimmermannella faecalis B187, [. faecalis ATCC 13722, [Zimmermannella] faecalis ATCC 13722
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.