STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381785_00058Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_000381785_00287
Unannotated protein.
 
 0.950
GCA_000381785_00331
Unannotated protein.
   
  0.906
GCA_000381785_03260
Unannotated protein.
   
  0.904
GCA_000381785_01543
Unannotated protein.
   
  0.846
GCA_000381785_02199
Unannotated protein.
  
 0.817
GCA_000381785_00218
Unannotated protein.
  
 
  0.809
GCA_000381785_00892
Unannotated protein.
  
 
   0.766
GCA_000381785_03108
Unannotated protein.
  
     0.762
GCA_000381785_00492
Unannotated protein.
  
  
  0.754
GCA_000381785_00077
Unannotated protein.
  
     0.752
Your Current Organism:
Amphritea japonica
NCBI taxonomy Id: 1278309
Other names: A. japonica ATCC BAA-1530, Amphritea japonica ATCC BAA-1530
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.