STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000381785_02531Unannotated protein. (708 aa)    
Predicted Functional Partners:
GCA_000381785_02523
Unannotated protein.
 
 
 0.967
GCA_000381785_02542
Unannotated protein.
 
  
 0.964
GCA_000381785_02528
Unannotated protein.
 
 
 0.957
GCA_000381785_02524
Unannotated protein.
 
  
 0.944
GCA_000381785_02526
Unannotated protein.
 
  
 0.917
GCA_000381785_02529
Unannotated protein.
 
  
 0.914
GCA_000381785_02525
Unannotated protein.
 
  
 0.912
GCA_000381785_02527
Unannotated protein.
 
  
 0.907
GCA_000381785_02544
Unannotated protein.
 
  
 0.873
GCA_000381785_02540
Unannotated protein.
 
  
 0.843
Your Current Organism:
Amphritea japonica
NCBI taxonomy Id: 1278309
Other names: A. japonica ATCC BAA-1530, Amphritea japonica ATCC BAA-1530
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.