STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR04800.1Putative acetyltransferase. (145 aa)    
Predicted Functional Partners:
EMR04799.1
Hypothetical protein; Alanine racemase, N-terminal domain.
 
     0.950
putP
Propionate transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.925
alr_1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.890
yxeP_1
Putative hydrolase YxeP.
 
     0.810
EMR00918.1
Uncharacterized protein conserved in bacteria.
   
   0.786
EMR04433.1
Susd and RagB outer membrane lipoprotein.
  
     0.547
EMR01148.1
Universal stress protein F.
  
     0.467
EMR01142.1
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.419
EMR02607.1
Hypothetical protein.
  
     0.417
EMR04432.1
Outer membrane receptor for ferrienterochelin and colicin.
  
     0.413
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.