STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oprM_2Outer membrane protein oprM precursor; Overlaps CDS with the same product name. (140 aa)    
Predicted Functional Partners:
bepE_1
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.994
oprM_1
Outer membrane protein oprM precursor; Overlaps CDS with the same product name.
     0.994
ttgB
Putative efflux pump membrane transporter TtgB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  0.988
EMR04721.1
Copper/silver efflux system outer membrane protein CusC.
     0.987
bepF
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.963
EMR01138.1
Multidrug resistance protein MdtN.
 
 0.745
macA_2
Macrolide-specific efflux protein macA precursor.
  
 0.688
bepE_2
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.623
czcB
Cation efflux system protein CzcB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.620
macA_1
Macrolide-specific efflux protein macA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.620
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.