STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR04556.1Peptidase family C25. (1125 aa)    
Predicted Functional Partners:
EMR04557.1
Hypothetical protein.
 
   
 0.918
pleC_5
Non-motile and phage-resistance protein.
  
  
 0.912
EMR02009.1
Hypothetical protein.
 
   
 0.778
EMR03618.1
Two component regulator propeller.
  
     0.775
EMR03252.1
Lipid A 3-O-deacylase (PagL).
  
  
 0.773
EMR04546.1
Cell surface protein SprA.
  
   
 0.736
EMR00652.1
PglZ domain protein.
  
  
 0.734
EMR01823.1
Putative methyltransferase (contains TPR repeat).
  
   
 0.728
cheA
Chemotaxis protein CheA.
  
  
 0.723
EMR04118.1
Hypothetical protein.
 
     0.695
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.