STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR04416.1Putative protein, possibly involved in nitrogen fixation. (76 aa)    
Predicted Functional Partners:
norB_1
Nitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.987
ccoP1
Cytochrome c oxidase subunit III.
 
  
 0.939
yccM_1
Putative electron transport protein yccM.
 
  
 0.938
EMR04418.1
Hypothetical protein.
 
  
 0.914
EMR04421.1
Uncharacterized protein conserved in bacteria.
 
  
 0.852
copA_2
Putative copper-importing P-type ATPase A.
 
  
 0.833
EMR04422.1
Hypothetical protein.
 
     0.822
hemN_1
Oxygen-independent coproporphyrinogen-III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.552
EMR04415.1
Stress responsive A/B Barrel Domain protein.
       0.440
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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