STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMR04435.1Outer membrane cobalamin receptor protein. (828 aa)    
Predicted Functional Partners:
EMR04434.1
TonB-linked outer membrane protein, SusC/RagA family.
    0.994
EMR04436.1
SusD family protein.
 
     0.931
EMR03014.1
SusD family protein.
 
     0.729
EMR00656.1
SusD family protein.
 
     0.722
EMR02319.1
Putative transmembrane transcriptional regulator (anti-sigma factor).
  
   0.714
EMR02553.1
Susd and RagB outer membrane lipoprotein.
 
     0.706
EMR03196.1
Putative membrane protein.
  
     0.654
EMR02188.1
SusD family protein.
  
     0.616
EMR03165.1
SusD family protein.
 
     0.611
EMR04433.1
Susd and RagB outer membrane lipoprotein.
  
     0.607
Your Current Organism:
Cesiribacter andamanensis
NCBI taxonomy Id: 1279009
Other names: C. andamanensis AMV16, Cesiribacter andamanensis AMV16, Flexibacter sp. AMV16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.